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Inviato da admin il 1 Aprile 2025
Titolo Progetto
Study of Noncoding RNAs in Organoids for Muscle-Nerve development (NOMeN)
Responsabile Scientifico
Monica Ballarino
Email Responsabile Scientifico
monica.ballarino@uniroma1.it
Partecipanti Interni
Giulia Buonaiuto
Abstract

NOMeN aims at shedding light on neuromuscular (NM) development from a noncoding RNA (ncRNA) perspective. Focus will be given  to tissue-specific ncRNAs that we discovered as players in the proper maturation of the two main cell types (i.e., motoneurons (MNs)  and skeletal muscle fibers) which form the neuromuscular junction (NMJ). By applying an experimental design which integrates  cellular and molecular approaches, we intend to recapitulate the simultaneous development of nerve and muscle lineages arising  from the same pool of progenitor cells through the generation of human NM organoids (NMOs). This system has the unique potential  to self-organize with a precise cell positional identity, allowing to study the crosstalk between muscle and nerve counterparts in NM  development and NMJ formation. The accuracy of this model will synergize with CRISPR-CAS9 based gene editing and advanced  single-cell transcriptomics to provide a cell type-specific picture of the coding and noncoding gene contributions to NM development  and enlighten the impact of relevant ncRNAs on cell differentiation or developmental gene pathways. Importantly, the neural or  muscle restricted expression of our ncRNA candidates will also allow us to examine non-cell autonomous effects of tissue-specific  expression defects. This is crucial for neuromuscular disorders where reciprocal interplay between muscles and nerves is a paradigm  (muscle atrophy upon denervation) or a challenge (dying back hypothesis).  Over years, our research teams dedicated substantial efforts into the characterization of tissue-specific long ncRNAs (lncRNAs), the  most recent class of RNAs increasingly implicated in gene expression regulation. On the “muscular” side, Research Unit 1 has  produced important knowledge on pCharme, a muscle-specific, evolutionary conserved lncRNA whose ablation severely impairs  skeletal muscle differentiation in both mouse and human. In the nucleus, pCharme acts as an epigenetic regulator by supervising the  chromatin localization of MATR3, a multifunctional protein whose mutations were identified in patients affected by myopathies or MN  diseases. On the “neuronal” side, Research Unit 2 has identified and described from a molecular and functional point-of-view, the  neuronal isoform of HOTAIRM1 (nHM1). nHM1 is required, at the proper developmental stage, for the transition between neuronal  precursors and differentiated neurons and it interacts with FUS, an RNA-binding protein whose mutations are associated to  amyotrophic lateral sclerosis, a disease characterized by degeneration and death of MNs. On these premises by i) generating  physiological NMOs or mutant derivatives lacking the expression of these lncRNAs and ii) by analyzing in these conditions the NMO  development, with attention to the structure and the function of the NMJ, our study will provide fresh knowledge to interpret the  human NM networks and their impairment upon perturbation of lncRNA homeostasis.  

Coordinatori e Partner
Università degli Studi di Roma "La Sapienza"; CNR-IBPM
Ruolo Ateneo
Coordinatore
Finanziamento - Suddivisione per unità organizzativa interna - Contributo Assegnato
€118.724
Contributo globale del Progetto per tutto il partenariato
€187.447
Tipologia Progetto
PRIN 2022
Titolo Progetto breve
Study of Noncoding RNAs in Organoids for Muscle-Nerve development (NOMeN)
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